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988 lines
43 KiB
988 lines
43 KiB
13 years ago
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\documentclass{beamer}
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\usepackage[utf8x]{inputenc}
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\usepackage{fancyvrb}
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\usepackage{color}
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\usepackage{graphicx}
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\usetheme{Darmstadt}
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\title {High-level parallel programming in C++}
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\author{Dénes Mátételki}
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\institute{www.emerson.com}
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\date{March 18, 2012}
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\makeatletter
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\include{colordefs}
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\makeatother
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\begin{document}
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%----------- slide --------------------------------------------------%
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\begin{frame}
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\titlepage
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\end{frame}
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%----------- slide --------------------------------------------------%
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\begin{frame}
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\frametitle{Table of contents}
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\tableofcontents
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\end{frame}
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\section{Theory}
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\subsection{High level vs. low level}
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%----------- slide --------------------------------------------------%
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\begin{frame}{Comparison}
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\begin{columns}[t]
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\column{1.5in}
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\begin{block}{High level}
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\small
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\begin{itemize}
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\item Auto scaling-up
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\item Threadpool handling, load balancing.
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\item Synchronization and mutexes are handled.
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\end{itemize}
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\end{block}
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\column{1.5in}
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\begin{block}{Low level}
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\small
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\begin{itemize}
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\item Manual thread creation.
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\item Manual joins and mutex handling.
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\item Better for event and I/O based threading.
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\item Compiler and external library independend.
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\end{itemize}
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\end{block}
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\end{columns}
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\end{frame}
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%----------- slide --------------------------------------------------%
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\begin{frame}{Compared softwares (performance, code complexity)}
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\begin{columns}[t]
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\column{1.5in}
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\begin{block}{Used}
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\small
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\begin{itemize}
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\item Standard c++ (serial examples)
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\item openMP\cite{openmp}
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\item Intel Thread Building Blocks (TBB)\cite{itbb}
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\item QtConcurrent\cite{qtconcurrent}
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\end{itemize}
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\end{block}
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\column{1.5in}
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\begin{block}{Skipped}
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\small
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\begin{itemize}
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\item std::thread, std::mutex (c++0x)\cite{cpp_thread}
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\item POSIX threads\cite{posix_threads}
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\item QThread\cite{qt_thread}
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\end{itemize}
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\end{block}
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\end{columns}
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\begin{exampleblock}{Co-existence\cite{itbb_openmp_nativethreads}}
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\small
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Possible, but the separate threadpools can lead to oversubscription.
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\end{exampleblock}
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\end{frame}
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%----------- slide --------------------------------------------------%
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\begin{frame}{Comparison}
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\begin{columns}[t]
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\column{1.5in}
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\begin{block}{openMP}
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\small
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\begin{itemize}
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\item Compiler support needed.
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\item C, C++, fortran.
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\item Best for bounded loops.
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\item No need for big code re-write.
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\item Hard to debug.
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\item Managed by a non-profit organization.
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\end{itemize}
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\end{block}
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\column{1.5in}
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\begin{block}{Intel TBB}
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\small
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\begin{itemize}
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\item Object oriented.
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\item Concurrent data types.
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\item Parallel algorithms.
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\item Work stealing: dynamic load sharing.
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\item Relies heavily on templates.
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\item Heavy code rewrite is needed.
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\end{itemize}
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\end{block}
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\column{1.5in}
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\begin{block}{QtConcurrent}
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\small
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\begin{itemize}
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\item Object oriented
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\item Limited number of algorithms.
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\item ...
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\end{itemize}
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\end{block}
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\end{columns}
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\end{frame}
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\subsection{Algorithms}
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%----------- slide --------------------------------------------------%
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\begin{frame}[fragile]{Used algorithms for testing}
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\begin{block}{List}
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\begin{itemize}
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\item Map - Applies a given function to each element of a container.
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\item Reduction - Combines the results of sub-parts.
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\item Sort - Puts elements of a list in a certain order.
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\end{itemize}
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\end{block}
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\begin{exampleblock}{Note}
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\small
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\begin{itemize}
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\item The used container is an \verb|std::vector<float>|
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\item Container size was 60 million with random floats [1, 1000]
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\item Execution times are the avareges of 3 executions.
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\item Used hardware was an Intel Xeon 64-bit machine with 6 cores (12 threads), 3,4Mz.
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\item Compiled with gcc-4.4 and use flags: \verb|-O3| \verb|-ffast-math| \verb|-fwhole-program|
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\verb|-fomit-frame-pointer| \verb|-march=native| \verb|-m64|
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\end{itemize}
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\end{exampleblock}
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\end{frame}
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\section{Code samples}
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\subsection{Map}
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%----------- slide --------------------------------------------------%
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\begin{frame}[fragile]{Serial map}
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\begin{block}{c++ code}
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\tiny
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\begin{Verbatim}[commandchars=\\\{\},numbers=left,firstnumber=1,stepnumber=1]
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\PY{k+kt}{float} \PY{n}{modify}\PY{p}{(}\PY{k+kt}{float} \PY{n}{value}\PY{p}{)}
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\PY{p}{\PYZob{}}
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\PY{k}{return} \PY{l+m+mf}{13.37} \PY{o}{*} \PY{n}{pow}\PY{p}{(}\PY{n}{sqrt}\PY{p}{(}\PY{n}{value}\PY{p}{)}\PY{p}{,} \PY{n}{log}\PY{p}{(}\PY{n}{value}\PY{p}{)}\PY{p}{)}\PY{p}{;}
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\PY{p}{\PYZcb{}}
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\PY{k+kt}{void} \PY{n}{serialMap}\PY{p}{(}\PY{n}{std}\PY{o}{:}\PY{o}{:}\PY{n}{vector}\PY{o}{<}\PY{k+kt}{float}\PY{o}{>}\PY{o}{&} \PY{n}{data}\PY{p}{)}
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\PY{p}{\PYZob{}}
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\PY{k}{for} \PY{p}{(}\PY{n}{size\PYZus{}t} \PY{n}{i} \PY{o}{=} \PY{l+m+mi}{0}\PY{p}{;} \PY{n}{i} \PY{o}{<} \PY{n}{data}\PY{p}{.}\PY{n}{size}\PY{p}{(}\PY{p}{)}\PY{p}{;} \PY{n}{i}\PY{o}{+}\PY{o}{+}\PY{p}{)}
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\PY{n}{modify}\PY{p}{(}\PY{n}{data}\PY{p}{[}\PY{n}{i}\PY{p}{]}\PY{p}{)}\PY{p}{;}
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\PY{p}{\PYZcb{}}
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\end{Verbatim}
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\end{block}
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\begin{exampleblock}{Note}
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\small
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\begin{itemize}
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\item ``chunksize'' equals the size of the data.
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\item This modify function will be used by the parallel examples too.
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\end{itemize}
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\end{exampleblock}
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\end{frame}
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%----------- slide --------------------------------------------------%
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\begin{frame}[fragile]{openMP parallel map}
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\begin{block}{c++ code}
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\tiny
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\begin{Verbatim}[commandchars=\\\{\},numbers=left,firstnumber=1,stepnumber=1]
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\PY{k+kt}{void} \PY{n}{openMpMap}\PY{p}{(}\PY{n}{std}\PY{o}{:}\PY{o}{:}\PY{n}{vector}\PY{o}{<}\PY{k+kt}{float}\PY{o}{>}\PY{o}{&} \PY{n}{data}\PY{p}{,}
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\PY{k}{const} \PY{k+kt}{int} \PY{n}{numberOfThreads}\PY{p}{,}
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\PY{k}{const} \PY{k+kt}{int} \PY{n}{chunkSize}\PY{p}{)}
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\PY{p}{\PYZob{}}
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\PY{n}{size\PYZus{}t} \PY{n}{i}\PY{p}{;}
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\PY{c+cp}{\PYZsh{}}\PY{c+cp}{pragma omp parallel for \PYZbs{}}
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\PY{c+cp}{ default(shared) private(i) \PYZbs{}}
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\PY{c+cp}{ schedule(dynamic, chunkSize) \PYZbs{}}
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\PY{c+cp}{ num\PYZus{}threads(numberOfThreads)}
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\PY{k}{for} \PY{p}{(}\PY{n}{i} \PY{o}{=} \PY{l+m+mi}{0}\PY{p}{;} \PY{n}{i} \PY{o}{<} \PY{n}{data}\PY{p}{.}\PY{n}{size}\PY{p}{(}\PY{p}{)}\PY{p}{;} \PY{n}{i}\PY{o}{+}\PY{o}{+}\PY{p}{)}
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\PY{n}{data}\PY{p}{[}\PY{n}{i}\PY{p}{]} \PY{o}{=} \PY{n}{modify}\PY{p}{(}\PY{n}{data}\PY{p}{[}\PY{n}{i}\PY{p}{]}\PY{p}{)}\PY{p}{;}
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\PY{p}{\PYZcb{}}
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\end{Verbatim}
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\end{block}
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\begin{exampleblock}{Note}
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\small
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Making it run in parallel is just a single pragma line.
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\end{exampleblock}
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\end{frame}
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%----------- slide --------------------------------------------------%
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\begin{frame}[fragile]{Intel TBB map}
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\begin{block}{c++ code}
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\tiny
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\begin{Verbatim}[commandchars=\\\{\},numbers=left,firstnumber=1,stepnumber=1]
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\PY{k}{class} \PY{n+nc}{itbbMap} \PY{p}{\PYZob{}}
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\PY{k}{public}\PY{o}{:}
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\PY{n}{itbbMap}\PY{p}{(}\PY{n}{std}\PY{o}{:}\PY{o}{:}\PY{n}{vector}\PY{o}{<}\PY{k+kt}{float}\PY{o}{>}\PY{o}{&} \PY{n}{data}\PY{p}{)}
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\PY{o}{:} \PY{n}{m\PYZus{}data}\PY{p}{(}\PY{n}{data}\PY{p}{)} \PY{p}{\PYZob{}}\PY{p}{\PYZcb{}}
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\PY{k+kt}{void} \PY{k}{operator}\PY{p}{(}\PY{p}{)}\PY{p}{(}\PY{k}{const} \PY{n}{tbb}\PY{o}{:}\PY{o}{:}\PY{n}{blocked\PYZus{}range}\PY{o}{<}\PY{n}{size\PYZus{}t}\PY{o}{>}\PY{o}{&} \PY{n}{r}\PY{p}{)} \PY{k}{const} \PY{p}{\PYZob{}}
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\PY{k}{for}\PY{p}{(} \PY{n}{size\PYZus{}t} \PY{n}{i} \PY{o}{=} \PY{n}{r}\PY{p}{.}\PY{n}{begin}\PY{p}{(}\PY{p}{)}\PY{p}{;} \PY{n}{i} \PY{o}{!}\PY{o}{=} \PY{n}{r}\PY{p}{.}\PY{n}{end}\PY{p}{(}\PY{p}{)}\PY{p}{;} \PY{n}{i}\PY{o}{+}\PY{o}{+} \PY{p}{)}
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\PY{n}{m\PYZus{}data}\PY{p}{[}\PY{n}{i}\PY{p}{]} \PY{o}{=} \PY{n}{modify}\PY{p}{(}\PY{n}{m\PYZus{}data}\PY{p}{[}\PY{n}{i}\PY{p}{]}\PY{p}{)}\PY{p}{;}
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\PY{p}{\PYZcb{}}
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\PY{k}{private}\PY{o}{:}
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\PY{n}{std}\PY{o}{:}\PY{o}{:}\PY{n}{vector}\PY{o}{<}\PY{k+kt}{float}\PY{o}{>}\PY{o}{&} \PY{n}{m\PYZus{}data}\PY{p}{;}
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\PY{p}{\PYZcb{}}\PY{p}{;}
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\PY{n}{tbb}\PY{o}{:}\PY{o}{:}\PY{n}{task\PYZus{}scheduler\PYZus{}init} \PY{n}{init}\PY{p}{(}\PY{n}{NUMBER\PYZus{}OF\PYZus{}THREADS}\PY{p}{)}\PY{p}{;}
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\PY{n}{itbbMap} \PY{n}{im}\PY{p}{(}\PY{n}{data}\PY{p}{)}\PY{p}{;}
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\PY{n}{tbb}\PY{o}{:}\PY{o}{:}\PY{n}{parallel\PYZus{}for}\PY{p}{(}\PY{n}{tbb}\PY{o}{:}\PY{o}{:}\PY{n}{blocked\PYZus{}range}\PY{o}{<}\PY{n}{size\PYZus{}t}\PY{o}{>}\PY{p}{(}\PY{l+m+mi}{0}\PY{p}{,} \PY{n}{data}\PY{p}{.}\PY{n}{size}\PY{p}{(}\PY{p}{)}\PY{p}{,} \PY{n}{CHUNK\PYZus{}SIZE}\PY{p}{)}\PY{p}{,} \PY{n}{im}\PY{p}{)}\PY{p}{;}
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\end{Verbatim}
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\end{block}
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\begin{exampleblock}{Note}
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\small
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Running a functor on chunks in parallel.
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\end{exampleblock}
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\end{frame}
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%----------- slide --------------------------------------------------%
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\begin{frame}[fragile]{QtConcurrent map}
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\begin{block}{c++ code}
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\tiny
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\begin{Verbatim}[commandchars=\\\{\},numbers=left,firstnumber=1,stepnumber=1]
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\PY{k+kt}{void} \PY{n}{QtMap}\PY{p}{(}\PY{n}{std}\PY{o}{:}\PY{o}{:}\PY{n}{vector}\PY{o}{<}\PY{k+kt}{float}\PY{o}{>}\PY{o}{&} \PY{n}{data}\PY{p}{)}
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\PY{p}{\PYZob{}}
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\PY{n}{QtConcurrent}\PY{o}{:}\PY{o}{:}\PY{n}{blockingMap}\PY{p}{(}\PY{n}{data}\PY{p}{,} \PY{n}{modify}\PY{p}{)}\PY{p}{;}
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\PY{p}{\PYZcb{}}
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\PY{n}{QThreadPool}\PY{o}{:}\PY{o}{:}\PY{n}{globalInstance}\PY{p}{(}\PY{p}{)}\PY{o}{-}\PY{o}{>}\PY{n}{setMaxThreadCount}\PY{p}{(}\PY{n}{NUMBER\PYZus{}OF\PYZus{}THREADS}\PY{p}{)}\PY{p}{;}
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\end{Verbatim}
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\end{block}
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\begin{exampleblock}{Note}
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\small
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\begin{itemize}
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\item Chunksize is 1.
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\item Blocks till the iterator reaches the end.
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\end{itemize}
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\end{exampleblock}
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\end{frame}
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|
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||
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%----------- slide --------------------------------------------------%
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\begin{frame}[fragile]{Map execution times}
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\begin{center}
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\includegraphics[height=5cm]{map.png}
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\end{center}
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\begin{exampleblock}{Note}
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\small
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Serial remained the fastest (memory bound?) - No need to paralellize.
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\end{exampleblock}
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\end{frame}
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\subsection{Reduce}
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%----------- slide --------------------------------------------------%
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\begin{frame}[fragile]{Serial reduce}
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\begin{block}{c++ code}
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\tiny
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\begin{Verbatim}[commandchars=\\\{\},numbers=left,firstnumber=1,stepnumber=1]
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\PY{k+kt}{float} \PY{n}{serialReduce}\PY{p}{(}\PY{n}{std}\PY{o}{:}\PY{o}{:}\PY{n}{vector}\PY{o}{<}\PY{k+kt}{float}\PY{o}{>}\PY{o}{&} \PY{n}{data}\PY{p}{)}
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\PY{p}{\PYZob{}}
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\PY{k+kt}{float} \PY{n}{min}\PY{p}{(}\PY{n}{FLT\PYZus{}MAX}\PY{p}{)}\PY{p}{;}
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\PY{k}{for} \PY{p}{(}\PY{n}{size\PYZus{}t} \PY{n}{i} \PY{o}{=} \PY{l+m+mi}{0}\PY{p}{;} \PY{n}{i} \PY{o}{<} \PY{n}{data}\PY{p}{.}\PY{n}{size}\PY{p}{(}\PY{p}{)}\PY{p}{;} \PY{n}{i}\PY{o}{+}\PY{o}{+}\PY{p}{)}
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\PY{k}{if} \PY{p}{(}\PY{n}{data}\PY{p}{[}\PY{n}{i}\PY{p}{]} \PY{o}{<} \PY{n}{min}\PY{p}{)}
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\PY{n}{min} \PY{o}{=} \PY{n}{data}\PY{p}{[}\PY{n}{i}\PY{p}{]}\PY{p}{;}
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\PY{k}{return} \PY{n}{min}\PY{p}{;}
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\PY{p}{\PYZcb{}}
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\end{Verbatim}
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\end{block}
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\begin{exampleblock}{Note}
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\small
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\begin{itemize}
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\item Minimum value search.
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\item Not actually a reduce.
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\item Following examples will try to achive this too.
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\end{itemize}
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\end{exampleblock}
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||
|
\end{frame}
|
||
|
|
||
|
%----------- slide --------------------------------------------------%
|
||
|
|
||
|
|
||
|
\begin{frame}[fragile]{openMP reduce}
|
||
|
|
||
|
\begin{block}{c++ code}
|
||
|
|
||
|
\tiny
|
||
|
\begin{Verbatim}[commandchars=\\\{\},numbers=left,firstnumber=1,stepnumber=1]
|
||
|
\PY{k+kt}{int} \PY{n}{openMpReduce}\PY{p}{(}\PY{n}{std}\PY{o}{:}\PY{o}{:}\PY{n}{vector}\PY{o}{<}\PY{k+kt}{float}\PY{o}{>}\PY{o}{&} \PY{n}{data}\PY{p}{,}
|
||
|
\PY{k}{const} \PY{k+kt}{int} \PY{n}{numberOfThreads}\PY{p}{,}
|
||
|
\PY{k}{const} \PY{k+kt}{int} \PY{n}{chunkSize}\PY{p}{)}
|
||
|
\PY{p}{\PYZob{}}
|
||
|
\PY{n}{size\PYZus{}t} \PY{n}{i}\PY{p}{;}
|
||
|
\PY{n}{std}\PY{o}{:}\PY{o}{:}\PY{n}{vector}\PY{o}{<}\PY{k+kt}{float}\PY{o}{>} \PY{n}{separate\PYZus{}results}\PY{p}{(}\PY{n}{numberOfThreads}\PY{p}{,} \PY{n}{FLT\PYZus{}MAX}\PY{p}{)}\PY{p}{;}
|
||
|
|
||
|
\PY{c+cp}{\PYZsh{}}\PY{c+cp}{pragma omp parallel \PYZbs{}}
|
||
|
\PY{c+cp}{ default(shared) private(i) \PYZbs{}}
|
||
|
\PY{c+cp}{ num\PYZus{}threads(numberOfThreads)}
|
||
|
\PY{p}{\PYZob{}}
|
||
|
\PY{k+kt}{int} \PY{n}{threadId} \PY{o}{=} \PY{n}{omp\PYZus{}get\PYZus{}thread\PYZus{}num}\PY{p}{(}\PY{p}{)}\PY{p}{;}
|
||
|
|
||
|
\PY{c+cp}{\PYZsh{}}\PY{c+cp}{pragma omp for schedule(dynamic, chunkSize)}
|
||
|
|
||
|
\PY{k}{for} \PY{p}{(}\PY{n}{i} \PY{o}{=} \PY{l+m+mi}{0}\PY{p}{;} \PY{n}{i} \PY{o}{<} \PY{n}{data}\PY{p}{.}\PY{n}{size}\PY{p}{(}\PY{p}{)}\PY{p}{;} \PY{n}{i}\PY{o}{+}\PY{o}{+}\PY{p}{)}
|
||
|
\PY{k}{if} \PY{p}{(}\PY{n}{separate\PYZus{}results}\PY{p}{[}\PY{n}{threadId}\PY{p}{]} \PY{o}{<} \PY{n}{data}\PY{p}{[}\PY{n}{i}\PY{p}{]}\PY{p}{)}
|
||
|
\PY{n}{separate\PYZus{}results}\PY{p}{[}\PY{n}{threadId}\PY{p}{]} \PY{o}{=} \PY{n}{data}\PY{p}{[}\PY{n}{i}\PY{p}{]}\PY{p}{;}
|
||
|
\PY{p}{\PYZcb{}}
|
||
|
|
||
|
\PY{k+kt}{float} \PY{n}{min}\PY{p}{(}\PY{n}{FLT\PYZus{}MAX}\PY{p}{)}\PY{p}{;}
|
||
|
\PY{k}{for} \PY{p}{(}\PY{n}{i} \PY{o}{=} \PY{l+m+mi}{0}\PY{p}{;} \PY{n}{i} \PY{o}{<} \PY{n}{numberOfThreads}\PY{p}{;} \PY{n}{i}\PY{o}{+}\PY{o}{+}\PY{p}{)}
|
||
|
\PY{k}{if} \PY{p}{(}\PY{n}{separate\PYZus{}results}\PY{p}{[}\PY{n}{i}\PY{p}{]} \PY{o}{<} \PY{n}{min}\PY{p}{)}
|
||
|
\PY{n}{min} \PY{o}{=} \PY{n}{separate\PYZus{}results}\PY{p}{[}\PY{n}{i}\PY{p}{]}\PY{p}{;}
|
||
|
|
||
|
\PY{k}{return} \PY{n}{min}\PY{p}{;}
|
||
|
\PY{p}{\PYZcb{}}
|
||
|
\end{Verbatim}
|
||
|
|
||
|
|
||
|
\end{block}
|
||
|
|
||
|
\end{frame}
|
||
|
|
||
|
|
||
|
%----------- slide --------------------------------------------------%
|
||
|
|
||
|
|
||
|
\begin{frame}[fragile]{Intel TBB reduce}
|
||
|
|
||
|
\begin{block}{c++ code}
|
||
|
|
||
|
\tiny
|
||
|
\begin{Verbatim}[commandchars=\\\{\},numbers=left,firstnumber=1,stepnumber=1]
|
||
|
\PY{k}{class} \PY{n+nc}{itbbReduce} \PY{p}{\PYZob{}}
|
||
|
\PY{k}{const} \PY{n}{std}\PY{o}{:}\PY{o}{:}\PY{n}{vector}\PY{o}{<}\PY{k+kt}{float}\PY{o}{>}\PY{o}{&} \PY{n}{m\PYZus{}data}\PY{p}{;}
|
||
|
\PY{k}{public}\PY{o}{:}
|
||
|
\PY{k+kt}{float} \PY{n}{m\PYZus{}min}\PY{p}{;}
|
||
|
|
||
|
\PY{n}{itbbReduce}\PY{p}{(}\PY{n}{std}\PY{o}{:}\PY{o}{:}\PY{n}{vector}\PY{o}{<}\PY{k+kt}{float}\PY{o}{>}\PY{o}{&} \PY{n}{data}\PY{p}{)} \PY{o}{:} \PY{n}{m\PYZus{}data}\PY{p}{(}\PY{n}{data}\PY{p}{)} \PY{p}{,} \PY{n}{m\PYZus{}min}\PY{p}{(}\PY{n}{FLT\PYZus{}MAX}\PY{p}{)} \PY{p}{\PYZob{}}\PY{p}{\PYZcb{}}
|
||
|
\PY{n}{itbbReduce}\PY{p}{(}\PY{n}{itbbReduce}\PY{o}{&} \PY{n}{other}\PY{p}{,} \PY{n}{tbb}\PY{o}{:}\PY{o}{:}\PY{n}{split}\PY{p}{)} \PY{o}{:} \PY{n}{m\PYZus{}data}\PY{p}{(}\PY{n}{other}\PY{p}{.}\PY{n}{m\PYZus{}data}\PY{p}{)}\PY{p}{,} \PY{n}{m\PYZus{}min}\PY{p}{(}\PY{n}{FLT\PYZus{}MAX}\PY{p}{)} \PY{p}{\PYZob{}}\PY{p}{\PYZcb{}}
|
||
|
|
||
|
\PY{k+kt}{void} \PY{k}{operator}\PY{p}{(}\PY{p}{)}\PY{p}{(}\PY{k}{const} \PY{n}{tbb}\PY{o}{:}\PY{o}{:}\PY{n}{blocked\PYZus{}range}\PY{o}{<}\PY{n}{size\PYZus{}t}\PY{o}{>}\PY{o}{&} \PY{n}{r}\PY{p}{)} \PY{p}{\PYZob{}}
|
||
|
\PY{k+kt}{float} \PY{n}{min} \PY{o}{=} \PY{n}{m\PYZus{}min}\PY{p}{;}
|
||
|
\PY{k}{for}\PY{p}{(}\PY{n}{size\PYZus{}t} \PY{n}{i} \PY{o}{=} \PY{n}{r}\PY{p}{.}\PY{n}{begin}\PY{p}{(}\PY{p}{)}\PY{p}{;} \PY{n}{i} \PY{o}{!}\PY{o}{=} \PY{n}{r}\PY{p}{.}\PY{n}{end}\PY{p}{(}\PY{p}{)}\PY{p}{;} \PY{n}{i}\PY{o}{+}\PY{o}{+}\PY{p}{)}
|
||
|
\PY{k}{if} \PY{p}{(} \PY{n}{m\PYZus{}data}\PY{p}{[}\PY{n}{i}\PY{p}{]} \PY{o}{<} \PY{n}{min} \PY{p}{)}
|
||
|
\PY{n}{min} \PY{o}{=} \PY{n}{m\PYZus{}data}\PY{p}{[}\PY{n}{i}\PY{p}{]}\PY{p}{;}
|
||
|
|
||
|
\PY{n}{m\PYZus{}min} \PY{o}{=} \PY{n}{min}\PY{p}{;}
|
||
|
\PY{p}{\PYZcb{}}
|
||
|
|
||
|
\PY{k+kt}{void} \PY{n}{join}\PY{p}{(}\PY{k}{const} \PY{n}{itbbReduce}\PY{o}{&} \PY{n}{other}\PY{p}{)} \PY{p}{\PYZob{}}
|
||
|
\PY{k}{if} \PY{p}{(} \PY{n}{other}\PY{p}{.}\PY{n}{m\PYZus{}min} \PY{o}{<} \PY{n}{m\PYZus{}min} \PY{p}{)}
|
||
|
\PY{n}{m\PYZus{}min} \PY{o}{=} \PY{n}{other}\PY{p}{.}\PY{n}{m\PYZus{}min}\PY{p}{;}
|
||
|
\PY{p}{\PYZcb{}}
|
||
|
\PY{p}{\PYZcb{}}\PY{p}{;}
|
||
|
|
||
|
\PY{n}{itbbReduce} \PY{n}{mif}\PY{p}{(}\PY{n}{data}\PY{p}{)}\PY{p}{;}
|
||
|
\PY{n}{tbb}\PY{o}{:}\PY{o}{:}\PY{n}{parallel\PYZus{}reduce}\PY{p}{(}\PY{n}{tbb}\PY{o}{:}\PY{o}{:}\PY{n}{blocked\PYZus{}range}\PY{o}{<}\PY{n}{size\PYZus{}t}\PY{o}{>}\PY{p}{(}\PY{l+m+mi}{0}\PY{p}{,} \PY{n}{data}\PY{p}{.}\PY{n}{size}\PY{p}{(}\PY{p}{)}\PY{p}{,} \PY{n}{CHUNK\PYZus{}SIZE}\PY{p}{)}\PY{p}{,} \PY{n}{mif}\PY{p}{)}\PY{p}{;}
|
||
|
\PY{k+kt}{float} \PY{n}{min} \PY{o}{=} \PY{n}{mif}\PY{p}{.}\PY{n}{m\PYZus{}min}\PY{p}{;}
|
||
|
\end{Verbatim}
|
||
|
|
||
|
\end{block}
|
||
|
|
||
|
\end{frame}
|
||
|
%----------- slide --------------------------------------------------%
|
||
|
|
||
|
|
||
|
\begin{frame}[fragile]{QtConcurrent reduce}
|
||
|
|
||
|
\begin{block}{c++ code}
|
||
|
|
||
|
\tiny
|
||
|
\begin{Verbatim}[commandchars=\\\{\},numbers=left,firstnumber=1,stepnumber=1]
|
||
|
\PY{k+kt}{void} \PY{n}{findMinimum}\PY{p}{(}\PY{k}{const} \PY{n}{std}\PY{o}{:}\PY{o}{:}\PY{n}{vector}\PY{o}{<}\PY{k+kt}{float}\PY{o}{>}\PY{o}{:}\PY{o}{:}\PY{n}{const\PYZus{}iterator} \PY{n}{begin}\PY{p}{,}
|
||
|
\PY{k}{const} \PY{n}{std}\PY{o}{:}\PY{o}{:}\PY{n}{vector}\PY{o}{<}\PY{k+kt}{float}\PY{o}{>}\PY{o}{:}\PY{o}{:}\PY{n}{const\PYZus{}iterator} \PY{n}{end}\PY{p}{,}
|
||
|
\PY{k+kt}{float} \PY{o}{*}\PY{n}{result}\PY{p}{)}
|
||
|
\PY{p}{\PYZob{}}
|
||
|
\PY{n}{result} \PY{o}{=} \PY{n}{std}\PY{o}{:}\PY{o}{:}\PY{n}{min\PYZus{}element}\PY{p}{(}\PY{n}{begin}\PY{p}{,} \PY{n}{end}\PY{p}{)}\PY{p}{;}
|
||
|
\PY{p}{\PYZcb{}}
|
||
|
|
||
|
|
||
|
\PY{k+kt}{float} \PY{n}{QtReduce}\PY{p}{(}\PY{n}{std}\PY{o}{:}\PY{o}{:}\PY{n}{vector}\PY{o}{<}\PY{k+kt}{float}\PY{o}{>}\PY{o}{&} \PY{n}{data}\PY{p}{,}
|
||
|
\PY{k}{const} \PY{k+kt}{int} \PY{n}{numberOfThreads}\PY{p}{,}
|
||
|
\PY{k}{const} \PY{k+kt}{int} \PY{n}{chunkSize}\PY{p}{)}
|
||
|
\PY{p}{\PYZob{}}
|
||
|
\PY{n}{std}\PY{o}{:}\PY{o}{:}\PY{n}{vector}\PY{o}{<}\PY{k+kt}{float}\PY{o}{>} \PY{n}{separate\PYZus{}results}\PY{p}{(}\PY{n}{numberOfThreads}\PY{p}{,} \PY{n}{FLT\PYZus{}MAX}\PY{p}{)}\PY{p}{;}
|
||
|
\PY{n}{QFutureSynchronizer}\PY{o}{<}\PY{k+kt}{void}\PY{o}{>} \PY{n}{synchronizer}\PY{p}{;}
|
||
|
|
||
|
\PY{k}{for}\PY{p}{(}\PY{k+kt}{int} \PY{n}{i} \PY{o}{=} \PY{l+m+mi}{0}\PY{p}{;} \PY{n}{i} \PY{o}{<} \PY{n}{numberOfThreads}\PY{p}{;} \PY{n}{i}\PY{o}{+}\PY{o}{+}\PY{p}{)}
|
||
|
\PY{n}{synchronizer}\PY{p}{.}\PY{n}{addFuture}\PY{p}{(}\PY{n}{QtConcurrent}\PY{o}{:}\PY{o}{:}\PY{n}{run}\PY{p}{(}\PY{n}{findLocalMinimum}\PY{p}{,}
|
||
|
\PY{n}{data}\PY{p}{.}\PY{n}{begin}\PY{p}{(}\PY{p}{)}\PY{o}{+}\PY{n}{i}\PY{o}{*}\PY{n}{chunkSize}\PY{p}{,}
|
||
|
\PY{n}{data}\PY{p}{.}\PY{n}{begin}\PY{p}{(}\PY{p}{)}\PY{o}{+}\PY{p}{(}\PY{n}{i}\PY{o}{+}\PY{l+m+mi}{1}\PY{p}{)}\PY{o}{*}\PY{n}{chunkSize}\PY{p}{,}
|
||
|
\PY{n}{separate\PYZus{}results}\PY{p}{.}\PY{n}{data}\PY{p}{(}\PY{p}{)}\PY{o}{+}\PY{n}{i}\PY{p}{)}\PY{p}{)}\PY{p}{;}
|
||
|
|
||
|
\PY{n}{synchronizer}\PY{p}{.}\PY{n}{waitForFinished}\PY{p}{(}\PY{p}{)}\PY{p}{;}
|
||
|
|
||
|
\PY{k+kt}{float} \PY{n}{min}\PY{p}{(}\PY{n}{FLT\PYZus{}MAX}\PY{p}{)}\PY{p}{;}
|
||
|
\PY{n}{findMinimum}\PY{p}{(}\PY{n}{separate\PYZus{}results}\PY{p}{.}\PY{n}{begin}\PY{p}{(}\PY{p}{)}\PY{p}{,} \PY{n}{separate\PYZus{}results}\PY{p}{.}\PY{n}{end}\PY{p}{(}\PY{p}{)}\PY{p}{,} \PY{n}{min}\PY{p}{)}\PY{p}{;}
|
||
|
\PY{k}{return} \PY{n}{min}\PY{p}{;}
|
||
|
\PY{p}{\PYZcb{}}
|
||
|
\end{Verbatim}
|
||
|
|
||
|
\end{block}
|
||
|
|
||
|
\end{frame}
|
||
|
|
||
|
%----------- slide --------------------------------------------------%
|
||
|
|
||
|
\begin{frame}[fragile]{Reduce execution times}
|
||
|
|
||
|
\begin{center}
|
||
|
\includegraphics[height=5cm]{reduce.png}
|
||
|
\end{center}
|
||
|
|
||
|
\begin{exampleblock}{Note}
|
||
|
\small
|
||
|
No need for more than 4 threads.
|
||
|
\end{exampleblock}
|
||
|
|
||
|
\end{frame}
|
||
|
|
||
|
\subsection{Sort}
|
||
|
|
||
|
%----------- slide --------------------------------------------------%
|
||
|
|
||
|
|
||
|
\begin{frame}[fragile]{Serial sort}
|
||
|
|
||
|
\begin{block}{c++ code}
|
||
|
|
||
|
\tiny
|
||
|
\begin{Verbatim}[commandchars=\\\{\},numbers=left,firstnumber=1,stepnumber=1]
|
||
|
\PY{k+kt}{void} \PY{n}{serialSort}\PY{p}{(}\PY{n}{std}\PY{o}{:}\PY{o}{:}\PY{n}{vector}\PY{o}{<}\PY{k+kt}{float}\PY{o}{>}\PY{o}{&} \PY{n}{data}\PY{p}{)}
|
||
|
\PY{p}{\PYZob{}}
|
||
|
\PY{n}{std}\PY{o}{:}\PY{o}{:}\PY{n}{sort}\PY{p}{(}\PY{n}{data}\PY{p}{.}\PY{n}{begin}\PY{p}{(}\PY{p}{)}\PY{p}{,} \PY{n}{data}\PY{p}{.}\PY{n}{end}\PY{p}{(}\PY{p}{)}\PY{p}{)}\PY{p}{;}
|
||
|
\PY{p}{\PYZcb{}}
|
||
|
\end{Verbatim}
|
||
|
|
||
|
\end{block}
|
||
|
|
||
|
\begin{exampleblock}{Note: quicksort}
|
||
|
\small
|
||
|
\begin{itemize}
|
||
|
\item Pick a pivot point.
|
||
|
\item Partition: Swap elements compared to pivot point.
|
||
|
\item Recursively calls itself with the 2 new partitions.
|
||
|
\end{itemize}
|
||
|
\end{exampleblock}
|
||
|
|
||
|
\end{frame}
|
||
|
|
||
|
%----------- slide --------------------------------------------------%
|
||
|
|
||
|
|
||
|
\begin{frame}[fragile]{openMP, Intel TBB sort}
|
||
|
|
||
|
\begin{block}{openMP c++ code}
|
||
|
|
||
|
\tiny
|
||
|
\begin{Verbatim}[commandchars=\\\{\},numbers=left,firstnumber=1,stepnumber=1]
|
||
|
\PY{c+cp}{\PYZsh{}}\PY{c+cp}{include <parallel}\PY{c+cp}{/}\PY{c+cp}{algorithm>}
|
||
|
|
||
|
\PY{k+kt}{void} \PY{n}{openMpSort}\PY{p}{(}\PY{n}{std}\PY{o}{:}\PY{o}{:}\PY{n}{vector}\PY{o}{<}\PY{k+kt}{float}\PY{o}{>}\PY{o}{&} \PY{n}{data}\PY{p}{)}
|
||
|
\PY{p}{\PYZob{}}
|
||
|
\PY{n}{\PYZus{}\PYZus{}gnu\PYZus{}parallel}\PY{o}{:}\PY{o}{:}\PY{n}{sort}\PY{p}{(}\PY{n}{data}\PY{p}{.}\PY{n}{begin}\PY{p}{(}\PY{p}{)}\PY{p}{,} \PY{n}{data}\PY{p}{.}\PY{n}{end}\PY{p}{(}\PY{p}{)}\PY{p}{)}\PY{p}{;}
|
||
|
\PY{p}{\PYZcb{}}
|
||
|
\end{Verbatim}
|
||
|
|
||
|
\end{block}
|
||
|
|
||
|
\begin{exampleblock}{Note}
|
||
|
\small
|
||
|
Some algorithms are already rewritten to work in parallel with openMP.
|
||
|
\end{exampleblock}
|
||
|
|
||
|
\begin{block}{Intel TBB c++ code}
|
||
|
|
||
|
\tiny
|
||
|
\begin{Verbatim}[commandchars=\\\{\},numbers=left,firstnumber=1,stepnumber=1]
|
||
|
\PY{k+kt}{void} \PY{n}{itbbSort}\PY{p}{(}\PY{n}{std}\PY{o}{:}\PY{o}{:}\PY{n}{vector}\PY{o}{<}\PY{k+kt}{float}\PY{o}{>}\PY{o}{&} \PY{n}{data}\PY{p}{)}
|
||
|
\PY{p}{\PYZob{}}
|
||
|
\PY{n}{tbb}\PY{o}{:}\PY{o}{:}\PY{n}{parallel\PYZus{}sort}\PY{p}{(}\PY{n}{data}\PY{p}{.}\PY{n}{begin}\PY{p}{(}\PY{p}{)}\PY{p}{,} \PY{n}{data}\PY{p}{.}\PY{n}{end}\PY{p}{(}\PY{p}{)}\PY{p}{)}\PY{p}{;}
|
||
|
\PY{p}{\PYZcb{}}
|
||
|
\end{Verbatim}
|
||
|
|
||
|
\end{block}
|
||
|
|
||
|
\end{frame}
|
||
|
|
||
|
%----------- slide --------------------------------------------------%
|
||
|
|
||
|
\begin{frame}[fragile]{Sort execution times}
|
||
|
|
||
|
\begin{center}
|
||
|
\includegraphics[height=5cm]{sort1.png}
|
||
|
\end{center}
|
||
|
|
||
|
\begin{exampleblock}{Note}
|
||
|
\small
|
||
|
No need for more than 6 threads.
|
||
|
\end{exampleblock}
|
||
|
|
||
|
\end{frame}
|
||
|
|
||
|
%----------- slide --------------------------------------------------%
|
||
|
|
||
|
|
||
|
\begin{frame}[fragile]{Custom QtConcurrent sort}
|
||
|
|
||
|
\begin{block}{c++ code}
|
||
|
|
||
|
\tiny
|
||
|
\begin{Verbatim}[commandchars=\\\{\},numbers=left,firstnumber=1,stepnumber=1]
|
||
|
\PY{k}{template} \PY{o}{<}\PY{k}{class} \PY{n+nc}{SortType}\PY{o}{>}
|
||
|
\PY{k+kt}{long} \PY{n}{QsPartition}\PY{p}{(}\PY{n}{SortType} \PY{n}{outputArray}\PY{p}{[}\PY{p}{]}\PY{p}{,} \PY{k+kt}{long} \PY{n}{left}\PY{p}{,} \PY{k+kt}{long} \PY{n}{right}\PY{p}{)} \PY{p}{\PYZob{}} \PY{p}{.}\PY{p}{.}\PY{p}{.} \PY{p}{\PYZcb{}}
|
||
|
|
||
|
\PY{k}{template} \PY{o}{<}\PY{k}{class} \PY{n+nc}{SortType}\PY{o}{>}
|
||
|
\PY{k+kt}{void} \PY{n}{QsSequential}\PY{p}{(}\PY{n}{SortType} \PY{n}{array}\PY{p}{[}\PY{p}{]}\PY{p}{,} \PY{k}{const} \PY{k+kt}{long} \PY{n}{left}\PY{p}{,} \PY{k}{const} \PY{k+kt}{long} \PY{n}{right}\PY{p}{)} \PY{p}{\PYZob{}} \PY{p}{.}\PY{p}{.}\PY{p}{.} \PY{p}{\PYZcb{}}
|
||
|
|
||
|
\PY{k}{template} \PY{o}{<}\PY{k}{class} \PY{n+nc}{SortType}\PY{o}{>}
|
||
|
\PY{k+kt}{void} \PY{n}{QuickSortTask} \PY{p}{(}\PY{n}{SortType} \PY{n}{array}\PY{p}{[}\PY{p}{]}\PY{p}{,} \PY{k}{const} \PY{k+kt}{long} \PY{n}{left}\PY{p}{,} \PY{k}{const} \PY{k+kt}{long} \PY{n}{right}\PY{p}{,} \PY{k}{const} \PY{k+kt}{int} \PY{n}{deep}\PY{p}{)}
|
||
|
\PY{p}{\PYZob{}}
|
||
|
\PY{k}{if} \PY{p}{(}\PY{n}{left} \PY{o}{<} \PY{n}{right}\PY{p}{)} \PY{p}{\PYZob{}}
|
||
|
\PY{k}{if} \PY{p}{(}\PY{n}{deep}\PY{p}{)} \PY{p}{\PYZob{}}
|
||
|
\PY{k}{const} \PY{k+kt}{long} \PY{n}{part} \PY{o}{=} \PY{n}{QsPartition}\PY{p}{(}\PY{n}{array}\PY{p}{,} \PY{n}{left}\PY{p}{,} \PY{n}{right}\PY{p}{)}\PY{p}{;}
|
||
|
\PY{n}{QtConcurrent}\PY{o}{:}\PY{o}{:}\PY{n}{run}\PY{p}{(}\PY{n}{QuickSortTask}\PY{o}{<}\PY{n}{SortType}\PY{o}{>}\PY{p}{,} \PY{n}{array}\PY{p}{,} \PY{n}{part} \PY{o}{+} \PY{l+m+mi}{1}\PY{p}{,} \PY{n}{right}\PY{p}{,} \PY{n}{deep} \PY{o}{-} \PY{l+m+mi}{1}\PY{p}{)}\PY{p}{;}
|
||
|
\PY{n}{QtConcurrent}\PY{o}{:}\PY{o}{:}\PY{n}{run}\PY{p}{(}\PY{n}{QuickSortTask}\PY{o}{<}\PY{n}{SortType}\PY{o}{>}\PY{p}{,} \PY{n}{array}\PY{p}{,} \PY{n}{left}\PY{p}{,} \PY{n}{part} \PY{o}{-} \PY{l+m+mi}{1}\PY{p}{,} \PY{n}{deep} \PY{o}{-} \PY{l+m+mi}{1}\PY{p}{)}\PY{p}{;}
|
||
|
\PY{p}{\PYZcb{}} \PY{k}{else} \PY{p}{\PYZob{}}
|
||
|
\PY{k}{const} \PY{k+kt}{long} \PY{n}{part} \PY{o}{=} \PY{n}{QsPartition}\PY{p}{(}\PY{n}{array}\PY{p}{,} \PY{n}{left}\PY{p}{,} \PY{n}{right}\PY{p}{)}\PY{p}{;}
|
||
|
\PY{n}{QsSequential}\PY{p}{(}\PY{n}{array}\PY{p}{,}\PY{n}{part} \PY{o}{+} \PY{l+m+mi}{1}\PY{p}{,}\PY{n}{right}\PY{p}{)}\PY{p}{;}
|
||
|
\PY{n}{QsSequential}\PY{p}{(}\PY{n}{array}\PY{p}{,}\PY{n}{left}\PY{p}{,}\PY{n}{part} \PY{o}{-} \PY{l+m+mi}{1}\PY{p}{)}\PY{p}{;}
|
||
|
\PY{p}{\PYZcb{}}
|
||
|
\PY{p}{\PYZcb{}}
|
||
|
\PY{p}{\PYZcb{}}
|
||
|
|
||
|
\PY{k+kt}{void} \PY{n}{QtSort}\PY{p}{(}\PY{n}{std}\PY{o}{:}\PY{o}{:}\PY{n}{vector}\PY{o}{<}\PY{k+kt}{float}\PY{o}{>}\PY{o}{&} \PY{n}{data}\PY{p}{)}
|
||
|
\PY{p}{\PYZob{}}
|
||
|
\PY{n}{QtConcurrent}\PY{o}{:}\PY{o}{:}\PY{n}{run}\PY{p}{(}\PY{n}{QuickSortTask}\PY{o}{<}\PY{k+kt}{float}\PY{o}{>}\PY{p}{,} \PY{n}{data}\PY{p}{.}\PY{n}{data}\PY{p}{(}\PY{p}{)}\PY{p}{,} \PY{l+m+mi}{0}\PY{p}{,} \PY{n}{data}\PY{p}{.}\PY{n}{size}\PY{p}{(}\PY{p}{)} \PY{o}{-} \PY{l+m+mi}{1}\PY{p}{,} \PY{l+m+mi}{6}\PY{p}{)}\PY{p}{;}
|
||
|
\PY{n}{QThreadPool}\PY{o}{:}\PY{o}{:}\PY{n}{globalInstance}\PY{p}{(}\PY{p}{)}\PY{o}{-}\PY{o}{>}\PY{n}{waitForDone}\PY{p}{(}\PY{p}{)}\PY{p}{;}
|
||
|
\PY{p}{\PYZcb{}}
|
||
|
\end{Verbatim}
|
||
|
|
||
|
\end{block}
|
||
|
|
||
|
\end{frame}
|
||
|
|
||
|
%----------- slide --------------------------------------------------%
|
||
|
|
||
|
|
||
|
\begin{frame}[fragile]{Custom openMP sort}
|
||
|
|
||
|
\begin{block}{c++ code}
|
||
|
|
||
|
\tiny
|
||
|
\begin{Verbatim}[commandchars=\\\{\},numbers=left,firstnumber=1,stepnumber=1]
|
||
|
\PY{k+kt}{void} \PY{n}{sample\PYZus{}qsort}\PY{p}{(}\PY{k+kt}{float}\PY{o}{*} \PY{n}{begin}\PY{p}{,} \PY{k+kt}{float}\PY{o}{*} \PY{n}{end}\PY{p}{)} \PY{p}{\PYZob{}} \PY{p}{.}\PY{p}{.}\PY{p}{.} \PY{p}{\PYZcb{}}
|
||
|
|
||
|
\PY{k+kt}{void} \PY{n}{sample\PYZus{}qsort\PYZus{}serial}\PY{p}{(}\PY{k+kt}{float}\PY{o}{*} \PY{n}{begin}\PY{p}{,} \PY{k+kt}{float}\PY{o}{*} \PY{n}{end}\PY{p}{)} \PY{p}{\PYZob{}} \PY{p}{.}\PY{p}{.}\PY{p}{.} \PY{p}{\PYZcb{}}
|
||
|
|
||
|
\PY{k+kt}{void} \PY{n}{sample\PYZus{}qsort\PYZus{}adaptive}\PY{p}{(}\PY{k+kt}{float}\PY{o}{*} \PY{n}{begin}\PY{p}{,} \PY{k+kt}{float}\PY{o}{*} \PY{n}{end}\PY{p}{,} \PY{k}{const} \PY{k+kt}{long} \PY{n}{nthreshold}\PY{p}{)}
|
||
|
\PY{p}{\PYZob{}}
|
||
|
\PY{k}{if} \PY{p}{(}\PY{n}{begin} \PY{o}{!}\PY{o}{=} \PY{n}{end}\PY{p}{)} \PY{p}{\PYZob{}}
|
||
|
\PY{c+c1}{// parition ...}
|
||
|
\PY{k}{if} \PY{p}{(}\PY{n}{end} \PY{o}{-} \PY{n}{begin} \PY{o}{+} \PY{l+m+mi}{1} \PY{o}{<}\PY{o}{=} \PY{n}{nthreshold}\PY{p}{)} \PY{p}{\PYZob{}}
|
||
|
\PY{n}{sample\PYZus{}qsort\PYZus{}serial}\PY{p}{(}\PY{n}{begin}\PY{p}{,} \PY{n}{middle}\PY{p}{)}\PY{p}{;}
|
||
|
\PY{n}{sample\PYZus{}qsort\PYZus{}serial}\PY{p}{(}\PY{o}{+}\PY{o}{+}\PY{n}{middle}\PY{p}{,} \PY{o}{+}\PY{o}{+}\PY{n}{end}\PY{p}{)}\PY{p}{;}
|
||
|
\PY{p}{\PYZcb{}} \PY{k}{else} \PY{p}{\PYZob{}}
|
||
|
\PY{c+cp}{\PYZsh{}}\PY{c+cp}{pragma omp task}
|
||
|
\PY{n}{sample\PYZus{}qsort\PYZus{}adaptive}\PY{p}{(}\PY{n}{begin}\PY{p}{,} \PY{n}{middle}\PY{p}{,} \PY{n}{nthreshold}\PY{p}{)}\PY{p}{;}
|
||
|
\PY{c+cp}{\PYZsh{}}\PY{c+cp}{pragma omp task}
|
||
|
\PY{n}{sample\PYZus{}qsort\PYZus{}adaptive}\PY{p}{(}\PY{o}{+}\PY{o}{+}\PY{n}{middle}\PY{p}{,} \PY{o}{+}\PY{o}{+}\PY{n}{end}\PY{p}{,} \PY{n}{nthreshold}\PY{p}{)}\PY{p}{;}
|
||
|
\PY{p}{\PYZcb{}}
|
||
|
\PY{p}{\PYZcb{}}
|
||
|
\PY{p}{\PYZcb{}}
|
||
|
|
||
|
\PY{k+kt}{void} \PY{n}{sample\PYZus{}qsort\PYZus{}adaptive}\PY{p}{(}\PY{k+kt}{float}\PY{o}{*} \PY{n}{begin}\PY{p}{,} \PY{k+kt}{float}\PY{o}{*} \PY{n}{end}\PY{p}{)}
|
||
|
\PY{p}{\PYZob{}}
|
||
|
\PY{k+kt}{long} \PY{n}{nthreshold} \PY{o}{=} \PY{n}{ceil}\PY{p}{(}\PY{n}{sqrt}\PY{p}{(}\PY{n}{end} \PY{o}{-} \PY{n}{begin} \PY{o}{+} \PY{l+m+mi}{1}\PY{p}{)}\PY{p}{)} \PY{o}{/} \PY{l+m+mi}{2}\PY{p}{;}
|
||
|
\PY{c+cp}{\PYZsh{}}\PY{c+cp}{pragma omp parallel}
|
||
|
\PY{c+cp}{\PYZsh{}}\PY{c+cp}{pragma omp single nowait}
|
||
|
\PY{n}{sample\PYZus{}qsort\PYZus{}adaptive}\PY{p}{(}\PY{n}{begin}\PY{p}{,} \PY{n}{end}\PY{p}{,} \PY{n}{nthreshold}\PY{p}{)}\PY{p}{;}
|
||
|
\PY{p}{\PYZcb{}}
|
||
|
\end{Verbatim}
|
||
|
|
||
|
\end{block}
|
||
|
|
||
|
\end{frame}
|
||
|
|
||
|
%----------- slide --------------------------------------------------%
|
||
|
|
||
|
\begin{frame}[fragile]{Sort times of custom algorithms}
|
||
|
|
||
|
\begin{center}
|
||
|
\includegraphics[height=5cm]{sort2.png}
|
||
|
\end{center}
|
||
|
|
||
|
|
||
|
\begin{exampleblock}{Note}
|
||
|
\small
|
||
|
Container size is 6M - miserable...
|
||
|
\end{exampleblock}
|
||
|
|
||
|
\end{frame}
|
||
|
|
||
|
%----------- slide --------------------------------------------------%
|
||
|
|
||
|
|
||
|
\begin{frame}[fragile]{Two quicksort approach to }
|
||
|
|
||
|
\begin{columns}[t]
|
||
|
|
||
|
\column{1.7in}
|
||
|
\begin{block}{Treshold}
|
||
|
\tiny
|
||
|
\begin{Verbatim}[commandchars=\\\{\},numbers=left,firstnumber=1,stepnumber=1]
|
||
|
\PY{k+kt}{void} \PY{n}{qsort}\PY{p}{(}\PY{k+kt}{float}\PY{o}{*} \PY{n}{begin}\PY{p}{,}
|
||
|
\PY{k+kt}{float}\PY{o}{*} \PY{n}{end}\PY{p}{,}
|
||
|
\PY{k}{const} \PY{k+kt}{long} \PY{n}{nthreshold}\PY{p}{)}
|
||
|
\PY{p}{\PYZob{}}
|
||
|
\PY{k}{if} \PY{p}{(}\PY{n}{begin} \PY{o}{!}\PY{o}{=} \PY{n}{end}\PY{p}{)} \PY{p}{\PYZob{}}
|
||
|
\PY{c+c1}{// parition ...}
|
||
|
\PY{k}{if} \PY{p}{(}\PY{n}{end}\PY{o}{-}\PY{n}{begin}\PY{o}{+}\PY{l+m+mi}{1} \PY{o}{<}\PY{o}{=} \PY{n}{nthreshold}\PY{p}{)} \PY{p}{\PYZob{}}
|
||
|
\PY{c+c1}{// serial sort ...}
|
||
|
\PY{p}{\PYZcb{}} \PY{k}{else} \PY{p}{\PYZob{}}
|
||
|
\PY{c+c1}{// parallel sort ...}
|
||
|
\PY{p}{\PYZcb{}}
|
||
|
\PY{p}{\PYZcb{}}
|
||
|
\PY{p}{\PYZcb{}}
|
||
|
|
||
|
\PY{k+kt}{long} \PY{n}{deep} \PY{o}{=}
|
||
|
\PY{n}{ceil}\PY{p}{(}\PY{n}{sqrt}\PY{p}{(}\PY{n}{end} \PY{o}{-} \PY{n}{begin} \PY{o}{+} \PY{l+m+mi}{1}\PY{p}{)}\PY{p}{)} \PY{o}{/} \PY{l+m+mi}{2}\PY{p}{;}
|
||
|
\end{Verbatim}
|
||
|
|
||
|
\end{block}
|
||
|
|
||
|
\column{1.5in}
|
||
|
\begin{block}{Depth}
|
||
|
\tiny
|
||
|
\begin{Verbatim}[commandchars=\\\{\},numbers=left,firstnumber=1,stepnumber=1]
|
||
|
\PY{k+kt}{void} \PY{n}{qsort}\PY{p}{(}\PY{k+kt}{float}\PY{o}{*} \PY{n}{begin}\PY{p}{,}
|
||
|
\PY{k+kt}{float}\PY{o}{*} \PY{n}{end}\PY{p}{,}
|
||
|
\PY{k}{const} \PY{k+kt}{int} \PY{n}{deep}\PY{p}{)}
|
||
|
\PY{p}{\PYZob{}}
|
||
|
\PY{k}{if} \PY{p}{(}\PY{n}{begin} \PY{o}{!}\PY{o}{=} \PY{n}{end}\PY{p}{)} \PY{p}{\PYZob{}}
|
||
|
\PY{c+c1}{// parition ...}
|
||
|
\PY{k}{if} \PY{p}{(}\PY{n}{deep}\PY{p}{)} \PY{p}{\PYZob{}}
|
||
|
\PY{c+c1}{// serial sort ...}
|
||
|
\PY{p}{\PYZcb{}} \PY{k}{else} \PY{p}{\PYZob{}}
|
||
|
\PY{c+c1}{// parallel sort with deep-1}
|
||
|
\PY{p}{\PYZcb{}}
|
||
|
\PY{p}{\PYZcb{}}
|
||
|
\PY{p}{\PYZcb{}}
|
||
|
|
||
|
\PY{k+kt}{long} \PY{n}{deep} \PY{o}{=} \PY{l+m+mi}{15}\PY{p}{;}
|
||
|
\end{Verbatim}
|
||
|
\end{block}
|
||
|
|
||
|
|
||
|
\end{columns}
|
||
|
|
||
|
\begin{exampleblock}{Note}
|
||
|
\small
|
||
|
Depth seems simpler yet faster.
|
||
|
\end{exampleblock}
|
||
|
|
||
|
\end{frame}
|
||
|
|
||
|
|
||
|
\section{Final thoughts}
|
||
|
|
||
|
|
||
|
%----------- slide --------------------------------------------------%
|
||
|
|
||
|
\subsection{Grainsize}
|
||
|
|
||
|
%----------- slide --------------------------------------------------%
|
||
|
|
||
|
\begin{frame}[fragile]{Chunk size}
|
||
|
|
||
|
\begin{center}
|
||
|
\includegraphics[height=5cm]{chunksize.png}
|
||
|
\end{center}
|
||
|
|
||
|
\begin{exampleblock}{Note}
|
||
|
\small
|
||
|
\begin{itemize}
|
||
|
\item Unit is loop interaction per chunk. Default value is 1.
|
||
|
\item Too small chunks can introduce more overhead than useful work.
|
||
|
\end{itemize}
|
||
|
\end{exampleblock}
|
||
|
|
||
|
\end{frame}
|
||
|
|
||
|
%----------- slide --------------------------------------------------%
|
||
|
|
||
|
\begin{frame}[fragile]{Grain size}
|
||
|
|
||
|
\begin{center}
|
||
|
\includegraphics[height=5cm]{grainsize.png}
|
||
|
\end{center}
|
||
|
|
||
|
\begin{exampleblock}{Note}
|
||
|
\small
|
||
|
\begin{itemize}
|
||
|
\item Unit is CPU cycles.
|
||
|
\item Should be at least ~100.000.
|
||
|
\end{itemize}
|
||
|
\end{exampleblock}
|
||
|
|
||
|
\end{frame}
|
||
|
|
||
|
%----------- slide --------------------------------------------------%
|
||
|
|
||
|
\begin{frame}[fragile]{Task stealing - Intel TBB}
|
||
|
|
||
|
\begin{block}{Task stealing}
|
||
|
\begin{itemize}
|
||
|
\item Each thread has a queue of tasks.
|
||
|
\item If a thread has no more tasks then it ``steals'' from another.
|
||
|
\item Think about tasks, not about threads when programming.
|
||
|
\end{itemize}
|
||
|
\end{block}
|
||
|
|
||
|
\begin{exampleblock}{Threadpool}
|
||
|
A threadpool with a commond concurrent queue of tasks is a common practice in networking servers.
|
||
|
\end{exampleblock}
|
||
|
|
||
|
\begin{exampleblock}{Work stealing}
|
||
|
Another implementation is Cilk\cite{cilk} - where each processor has a stack of frames.
|
||
|
\end{exampleblock}
|
||
|
|
||
|
|
||
|
\end{frame}
|
||
|
|
||
|
|
||
|
\subsection{Convolution}
|
||
|
|
||
|
%----------- slide --------------------------------------------------%
|
||
|
|
||
|
\begin{frame}[fragile]{1D gaussian filter}
|
||
|
|
||
|
\begin{columns}[t]
|
||
|
|
||
|
\column{2.5in}
|
||
|
|
||
|
\begin{block}{c++ code}
|
||
|
|
||
|
\tiny
|
||
|
\begin{Verbatim}[commandchars=\\\{\},numbers=left,firstnumber=1,stepnumber=1]
|
||
|
\PY{k+kt}{void} \PY{n}{serialConvolution}\PY{p}{(}\PY{n}{std}\PY{o}{:}\PY{o}{:}\PY{n}{vector}\PY{o}{<}\PY{k+kt}{float}\PY{o}{>}\PY{o}{&} \PY{n}{output}\PY{p}{,}
|
||
|
\PY{k}{const} \PY{n}{std}\PY{o}{:}\PY{o}{:}\PY{n}{vector}\PY{o}{<}\PY{k+kt}{float}\PY{o}{>}\PY{o}{&} \PY{n}{input}\PY{p}{,}
|
||
|
\PY{k}{const} \PY{n}{std}\PY{o}{:}\PY{o}{:}\PY{n}{vector}\PY{o}{<}\PY{k+kt}{float}\PY{o}{>}\PY{o}{&} \PY{n}{kernel}\PY{p}{)}
|
||
|
\PY{p}{\PYZob{}}
|
||
|
\PY{c+c1}{// skipping the edges: separate loops, paddings}
|
||
|
\PY{c+c1}{// output.size == input.size()-kernel.size()-1;}
|
||
|
|
||
|
\PY{k}{for} \PY{p}{(}\PY{n}{size\PYZus{}t} \PY{n}{i} \PY{o}{=} \PY{l+m+mi}{0}\PY{p}{;} \PY{n}{i} \PY{o}{<} \PY{n}{output}\PY{p}{.}\PY{n}{size}\PY{p}{(}\PY{p}{)}\PY{p}{;} \PY{n}{i}\PY{o}{+}\PY{o}{+}\PY{p}{)} \PY{p}{\PYZob{}}
|
||
|
\PY{k+kt}{float} \PY{n}{sum} \PY{o}{=} \PY{l+m+mi}{0}\PY{p}{;}
|
||
|
\PY{k}{for} \PY{p}{(}\PY{n}{size\PYZus{}t} \PY{n}{j} \PY{o}{=} \PY{l+m+mi}{0}\PY{p}{;} \PY{n}{j} \PY{o}{<}\PY{o}{=} \PY{n}{kernel}\PY{p}{.}\PY{n}{size}\PY{p}{(}\PY{p}{)}\PY{p}{;} \PY{n}{j}\PY{o}{+}\PY{o}{+}\PY{p}{)}
|
||
|
\PY{n}{sum} \PY{o}{+}\PY{o}{=} \PY{n}{input}\PY{p}{[}\PY{n}{i}\PY{o}{+}\PY{n}{j}\PY{p}{]} \PY{o}{*} \PY{n}{kernel}\PY{p}{[}\PY{n}{j}\PY{p}{]}\PY{p}{;}
|
||
|
|
||
|
\PY{n}{output}\PY{p}{[}\PY{n}{i}\PY{p}{]} \PY{o}{=} \PY{n}{sum}\PY{p}{;}
|
||
|
\PY{p}{\PYZcb{}}
|
||
|
\PY{p}{\PYZcb{}}
|
||
|
\end{Verbatim}
|
||
|
|
||
|
|
||
|
\end{block}
|
||
|
|
||
|
\column{1.5in}
|
||
|
|
||
|
\includegraphics[height=3cm]{1d_gauss.png}
|
||
|
|
||
|
\end{columns}
|
||
|
|
||
|
\begin{exampleblock}{Note}
|
||
|
\tiny
|
||
|
\verb|float kernel[7] = { 0.06, 0.061, 0.242, 0.383, 0.242, 0.061, 0.06 }|
|
||
|
\end{exampleblock}
|
||
|
|
||
|
\end{frame}
|
||
|
|
||
|
|
||
|
%----------- slide --------------------------------------------------%
|
||
|
|
||
|
|
||
|
\begin{frame}[fragile]{Optimized convolution}
|
||
|
|
||
|
\begin{block}{c++ code}
|
||
|
|
||
|
\tiny
|
||
|
\begin{Verbatim}[commandchars=\\\{\},numbers=left,firstnumber=1,stepnumber=1]
|
||
|
\PY{k+kt}{void} \PY{k}{operator}\PY{p}{(}\PY{p}{)}\PY{p}{(}\PY{k}{const} \PY{n}{tbb}\PY{o}{:}\PY{o}{:}\PY{n}{blocked\PYZus{}range}\PY{o}{<}\PY{n}{size\PYZus{}t}\PY{o}{>}\PY{o}{&} \PY{n}{r}\PY{p}{)} \PY{k}{const}
|
||
|
\PY{p}{\PYZob{}}
|
||
|
\PY{c+c1}{// skipping the edges, shall be done in separate task}
|
||
|
\PY{k}{const} \PY{k+kt}{float}\PY{o}{*} \PY{n}{p} \PY{o}{=} \PY{o}{&}\PY{n}{m\PYZus{}input}\PY{p}{[}\PY{l+m+mi}{0}\PY{p}{]} \PY{o}{+} \PY{n}{r}\PY{p}{.}\PY{n}{begin}\PY{p}{(}\PY{p}{)}\PY{p}{;}
|
||
|
\PY{k+kt}{float}\PY{o}{*} \PY{n}{d} \PY{o}{=} \PY{o}{&}\PY{n}{m\PYZus{}output}\PY{p}{[}\PY{l+m+mi}{0}\PY{p}{]} \PY{o}{+} \PY{n}{r}\PY{p}{.}\PY{n}{begin}\PY{p}{(}\PY{p}{)}\PY{p}{;}
|
||
|
|
||
|
\PY{k}{const} \PY{n}{size\PYZus{}t} \PY{n}{n} \PY{o}{=} \PY{n}{m\PYZus{}kernel}\PY{p}{.}\PY{n}{size}\PY{p}{(}\PY{p}{)}\PY{p}{;}
|
||
|
\PY{k+kt}{float} \PY{n}{k}\PY{p}{[}\PY{n}{n}\PY{p}{]}\PY{p}{;} \PY{c+c1}{// pre-read kernel}
|
||
|
\PY{k+kt}{float} \PY{n}{c}\PY{p}{[}\PY{n}{n}\PY{p}{]}\PY{p}{;} \PY{c+c1}{// pre-read values}
|
||
|
\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{0}\PY{p}{]} \PY{o}{=} \PY{n}{m\PYZus{}kernel}\PY{p}{[}\PY{l+m+mi}{0}\PY{p}{]}\PY{p}{;}
|
||
|
\PY{k}{for} \PY{p}{(}\PY{n}{size\PYZus{}t} \PY{n}{i} \PY{o}{=} \PY{l+m+mi}{1}\PY{p}{;} \PY{n}{i} \PY{o}{<} \PY{n}{n}\PY{p}{;} \PY{o}{+}\PY{o}{+}\PY{n}{i}\PY{p}{)} \PY{p}{\PYZob{}}
|
||
|
\PY{n}{c}\PY{p}{[}\PY{n}{i}\PY{p}{]} \PY{o}{=} \PY{n}{m\PYZus{}input}\PY{p}{[}\PY{n}{i}\PY{o}{-}\PY{l+m+mi}{1}\PY{p}{]}\PY{p}{;}
|
||
|
\PY{n}{k}\PY{p}{[}\PY{n}{i}\PY{p}{]} \PY{o}{=} \PY{n}{m\PYZus{}kernel}\PY{p}{[}\PY{n}{i}\PY{p}{]}\PY{p}{;}
|
||
|
\PY{p}{\PYZcb{}}
|
||
|
|
||
|
\PY{c+c1}{// chunk size \PYZpc{} kernel.size() != 0 should be handled...}
|
||
|
\PY{k}{for} \PY{p}{(}\PY{n}{size\PYZus{}t} \PY{n}{i} \PY{o}{=} \PY{l+m+mi}{0}\PY{p}{;} \PY{n}{i} \PY{o}{<} \PY{n}{r}\PY{p}{.}\PY{n}{size}\PY{p}{(}\PY{p}{)}\PY{p}{;} \PY{n}{i} \PY{o}{+}\PY{o}{=} \PY{n}{n}\PY{p}{)} \PY{p}{\PYZob{}}
|
||
|
\PY{n}{d}\PY{p}{[}\PY{n}{i}\PY{o}{+}\PY{l+m+mi}{0}\PY{p}{]} \PY{o}{=} \PY{p}{(}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{0}\PY{p}{]} \PY{o}{=} \PY{n}{p}\PY{p}{[}\PY{n}{i}\PY{o}{+}\PY{l+m+mi}{0}\PY{p}{]}\PY{p}{)}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{0}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{1}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{2}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{2}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{2}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{3}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{3}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{4}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{4}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{5}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{5}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{6}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{6}\PY{p}{]}\PY{p}{;}
|
||
|
\PY{n}{d}\PY{p}{[}\PY{n}{i}\PY{o}{+}\PY{l+m+mi}{1}\PY{p}{]} \PY{o}{=} \PY{p}{(}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{6}\PY{p}{]} \PY{o}{=} \PY{n}{p}\PY{p}{[}\PY{n}{i}\PY{o}{+}\PY{l+m+mi}{1}\PY{p}{]}\PY{p}{)}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{0}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{0}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{2}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{1}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{2}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{2}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{3}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{3}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{4}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{4}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{5}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{5}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{6}\PY{p}{]}\PY{p}{;}
|
||
|
\PY{n}{d}\PY{p}{[}\PY{n}{i}\PY{o}{+}\PY{l+m+mi}{2}\PY{p}{]} \PY{o}{=} \PY{p}{(}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{5}\PY{p}{]} \PY{o}{=} \PY{n}{p}\PY{p}{[}\PY{n}{i}\PY{o}{+}\PY{l+m+mi}{2}\PY{p}{]}\PY{p}{)}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{0}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{6}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{2}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{0}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{2}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{1}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{3}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{2}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{4}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{3}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{5}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{4}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{6}\PY{p}{]}\PY{p}{;}
|
||
|
\PY{n}{d}\PY{p}{[}\PY{n}{i}\PY{o}{+}\PY{l+m+mi}{3}\PY{p}{]} \PY{o}{=} \PY{p}{(}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{4}\PY{p}{]} \PY{o}{=} \PY{n}{p}\PY{p}{[}\PY{n}{i}\PY{o}{+}\PY{l+m+mi}{3}\PY{p}{]}\PY{p}{)}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{0}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{5}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{2}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{6}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{2}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{0}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{3}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{1}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{4}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{2}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{5}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{3}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{6}\PY{p}{]}\PY{p}{;}
|
||
|
\PY{n}{d}\PY{p}{[}\PY{n}{i}\PY{o}{+}\PY{l+m+mi}{4}\PY{p}{]} \PY{o}{=} \PY{p}{(}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{3}\PY{p}{]} \PY{o}{=} \PY{n}{p}\PY{p}{[}\PY{n}{i}\PY{o}{+}\PY{l+m+mi}{4}\PY{p}{]}\PY{p}{)}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{0}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{4}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{2}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{5}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{2}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{6}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{3}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{0}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{4}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{1}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{5}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{2}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{6}\PY{p}{]}\PY{p}{;}
|
||
|
\PY{n}{d}\PY{p}{[}\PY{n}{i}\PY{o}{+}\PY{l+m+mi}{5}\PY{p}{]} \PY{o}{=} \PY{p}{(}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{2}\PY{p}{]} \PY{o}{=} \PY{n}{p}\PY{p}{[}\PY{n}{i}\PY{o}{+}\PY{l+m+mi}{5}\PY{p}{]}\PY{p}{)}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{0}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{3}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{2}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{4}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{2}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{5}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{3}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{6}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{4}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{0}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{5}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{1}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{6}\PY{p}{]}\PY{p}{;}
|
||
|
\PY{n}{d}\PY{p}{[}\PY{n}{i}\PY{o}{+}\PY{l+m+mi}{6}\PY{p}{]} \PY{o}{=} \PY{p}{(}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{1}\PY{p}{]} \PY{o}{=} \PY{n}{p}\PY{p}{[}\PY{n}{i}\PY{o}{+}\PY{l+m+mi}{6}\PY{p}{]}\PY{p}{)}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{0}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{2}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{2}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{3}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{2}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{4}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{3}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{5}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{4}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{6}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{5}\PY{p}{]}\PY{o}{+}\PY{n}{c}\PY{p}{[}\PY{l+m+mi}{0}\PY{p}{]}\PY{o}{*}\PY{n}{k}\PY{p}{[}\PY{l+m+mi}{6}\PY{p}{]}\PY{p}{;}
|
||
|
\PY{p}{\PYZcb{}}
|
||
|
\PY{p}{\PYZcb{}}
|
||
|
\end{Verbatim}
|
||
|
|
||
|
|
||
|
\end{block}
|
||
|
|
||
|
\end{frame}
|
||
|
|
||
|
|
||
|
%----------- slide --------------------------------------------------%
|
||
|
|
||
|
\begin{frame}[fragile]{Convolution running times}
|
||
|
|
||
|
\begin{center}
|
||
|
\includegraphics[height=5cm]{convolution.png}
|
||
|
\end{center}
|
||
|
|
||
|
|
||
|
\begin{exampleblock}{Note}
|
||
|
\small
|
||
|
Memory-read optimalization can result the same performance improvements as parallelization.
|
||
|
\end{exampleblock}
|
||
|
|
||
|
\end{frame}
|
||
|
|
||
|
%----------- slide --------------------------------------------------%
|
||
|
|
||
|
|
||
|
|
||
|
\subsection{Summary}
|
||
|
|
||
|
\begin{frame}{Things to keep in mind}
|
||
|
|
||
|
\begin{block}{Checklist}
|
||
|
\small
|
||
|
\begin{itemize}
|
||
|
\item Pass primitive types by value.
|
||
|
\item Pass objects by address.
|
||
|
\item Have function-local copies of member variables.
|
||
|
\item Avoid to read values multiple times.
|
||
|
\item Choose correct chunk size.
|
||
|
\item Instead of shared memory, consider reduction.
|
||
|
\item Plan datastructures to avoid memory-boundings.*
|
||
|
\end{itemize}
|
||
|
\end{block}
|
||
|
|
||
|
\pause
|
||
|
|
||
|
\begin{exampleblock}{*data-oriented design\cite{data_oriented_design}}
|
||
|
\small
|
||
|
If only someone could tell us more about it...
|
||
|
\end{exampleblock}
|
||
|
|
||
|
\end{frame}
|
||
|
|
||
|
|
||
|
\begin{frame}{Links}
|
||
|
|
||
|
\tiny
|
||
|
\begin{thebibliography}{100}
|
||
|
\bibitem{openmp}openMP.\url{http://openmp.org}
|
||
|
\bibitem{itbb}Intel Thread Building Blocks.\url{http://threadingbuildingblocks.org/}
|
||
|
\bibitem{qtconcurrent}QtConcurrent.\url{http://doc.qt.nokia.com/4.8-snapshot/qtconcurrent.html}
|
||
|
\bibitem{cilk}Cilk.\url{http://software.intel.com/en-us/articles/intel-cilk-plus}
|
||
|
\bibitem{itbb_openmp_nativethreads}Comparison of Intel TBB, openMP and native threads.\url{http://software.intel.com/en-us/articles/intel-threading-building-blocks-openmp-or-native-threads/}
|
||
|
|
||
|
\bibitem{cpp_thread}std::thread in C++\url{http://en.cppreference.com/w/cpp/thread}
|
||
|
\bibitem{posix_threads}POSIX threads tutorial.\url{http://www.yolinux.com/TUTORIALS/LinuxTutorialPosixThreads.html}
|
||
|
\bibitem{qt_thread}Qt threads.\url{http://qt-project.org/doc/qt-4.8/threads.html}
|
||
|
|
||
|
\bibitem{data_oriented_design}Data oriented design.\url{http://gamesfromwithin.com/data-oriented-design}
|
||
|
|
||
|
\bibitem{latex_beamer}\LaTeX{} beamer class for creating presentations.\url{https://bitbucket.org/rivanvx/beamer/wiki/Home}
|
||
|
\bibitem{gnuplot}Gnuplot - An open source plotting software.\url{http://www.gnuplot.info/}
|
||
|
|
||
|
\end{thebibliography}
|
||
|
\end{frame}
|
||
|
|
||
|
|
||
|
\end{document}
|